List of publications

Tjalsma, S. J. D., Hori, M., Sato, Y., Bousard, A., Ohi, A., Raposo, A. C., Roensch, J., Le Saux, A., Nogami, J., Maehara, K., Kujirai, T., Handa, T., Bagés-Arnal, S., Ohkawa, Y., Kurumizaka, H., da Rocha, S. T., Żylicz, J. J., Kimura, H., & Heard, E. (2021). H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing. EMBO Reports. doi: 10.15252/embr.202051989

Panda, A., Żylicz, J. J., and Pasque, V. (2020). New Insights into X-Chromosome Reactivation during Reprogramming to PluripotencyCells9, 2706. doi: 10.3390/cells9122706.

Żylicz, J. J., and Heard, E. (2020). Molecular Mechanisms of Facultative Heterochromatin Formation: An X-Chromosome Perspective. Annual Review of Biochemistry89. doi: 10.1146/annurev-biochem-062917-012655

Żylicz, J.J.° (2020). Defined Stem Cell Culture Conditions to Model Mouse Blastocyst Development. Current Protocols in Stem Cell Biology, 52(1), e105. doi:10.1002/cpsc.105

Dossin, F., Pinheiro, I.#Żylicz, J.J.#, Roensch, J., Le Saux, A., Collombet, S., Chelmicki, T., Kapoor, V., Zhan, Y., Dingli, F., Loew, D., Mercher, T., Dekker, J., and Heard, E.° (2020). SPEN integrates transcriptional and epigenetic control of X-inactivationNature. doi:10.1038/s41586-020-1974-9

Żylicz, J.J.#, Bousard, A.#, Zumer, K., Dossin, F., Mohammad, E., da Rocha, S.T., Schwalb, B., Syx, L., Dingli, F., Loew, D., Cramer, P., and Heard, E.° (2019). The implication of early chromatin changes in X chromosome inactivation. Cell, 176, 182-197. doi:10.1016/j.cell.2018.11.041

Bousard, A.#, Raposo, A.C.#Żylicz, J.J.#, Picard, C., Pires, V.B., Qi, Y., Gil, C., Syx, L., Chang, H.Y., Heard, E. °, and da Rocha, S.T.° (2019). The role of Xist‐mediated Polycomb recruitment in the initiation of X‐chromosome inactivation. EMBO Reports. doi:10.15252/embr.201948019

van Bemmel, J.G.#°, Galupa, R.#, Gard, C., Servant, N., Picard, C., Davies, J., Szempruch, A.J., Zhan, Y., Żylicz, J.J., Nora, E.P., Lameiras, S., de Wit, E., Gentien, D., Baulande, S., Giorgetti, L., Guttman, M., Hughes, J.R., Higgs, D.R., Gribnau, J., and Heard, E. °(2019). The bipartite TAD organization of the X-inactivation center ensures opposing developmental regulation of Tsix and Xist. Nat Genetics, 51, 1024-1034. doi:10.1038/s41588-019-0412-0

Żylicz, J.J.#, Borensztein, M.#, Wong, F.C., Huang, Y., Lee, C., Dietmann, S., and Surani, M.A.° (2018). G9a regulates temporal preimplantation developmental program and lineage segregation in blastocystElife. doi:10.7554/eLife.33361

Huang, Y., Kim, J.K., Do, D.V., Lee, C., Penfold, C.A., Żylicz, J.J., Marioni, J.C., Hackett, J.A., and Surani, M.A.° (2017). Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transitionElife. doi:10.7554/eLife.22345

Murakami, K.#, Gunesdogan, U.#Żylicz, J.J., Tang W.W.C., Sengupta, R., Kobayashi T., Kim S., Butler R., Dietmann S., and Surani, M.A.° (2016). NANOG alone induces germ cells in competent in vitro epiblast by activating regulatory elements. Nature, 529, 403-407. doi:10.1038/nature16480

Żylicz, J.J., Dietmann, S., Gunesdogan, U., Hackett, J.A., Cougot, D., Lee, C., and Surani, M.A.° (2015). Chromatin dynamics and the role of G9a in gene regulation and enhancer silencing during early mouse development. Elife, 4. doi:10.7554/eLife.09571

Kim, S., Gunesdogan, U., Żylicz, J.J., Hackett, J.A., Cougot, D., Bao, S., Lee, C., Dietmann, S., Allen, G.E., Sengupta, R., and Surani, M.A.° (2014). PRMT5 protects genomic integrity during global DNA demethylation in primordial germ cells and preimplantation embryosMolecular Cell, 56, 564-579. doi:10.1016/j.molcel.2014.10.003

Hackett, J.A., Sengupta, R.#Żylicz, J.J.#, Murakami, K.#, Lee, C., Down, T.A., and Surani, M.A.° (2013). Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosineScience, 339, 448-452. doi:10.1126/science.1229277

Hackett, J.A., Żylicz, J.J., and Surani, M.A.° (2012). Parallel mechanisms of epigenetic reprogramming in the germline. Trends in Genetics, 28, 164-174. doi:10.1016/j.tig.2012.01.005

Nguyen, K.A., Żylicz, J., Szczesny, P., Sroka, A., Hunter, N., and Potempa, J.° (2009). Verification of a topology model of PorT as an integral outer-membrane protein in Porphyromonas gingivalisMicrobiology, 155, 328-337. doi:10.1099/mic.0.024323-0

# equal contributions   ° corresponding authors