List of publications

Żylicz, J. J., and Heard, E. (2020). Molecular Mechanisms of Facultative Heterochromatin Formation: An X-Chromosome Perspective. Annual Review of Biochemistry89. doi: 10.1146/annurev-biochem-062917-012655

Żylicz, J.J.° (2020). Defined Stem Cell Culture Conditions to Model Mouse Blastocyst Development. Current Protocols in Stem Cell Biology, 52(1), e105. doi:10.1002/cpsc.105

Dossin, F., Pinheiro, I.#Żylicz, J.J.#, Roensch, J., Le Saux, A., Collombet, S., Chelmicki, T., Kapoor, V., Zhan, Y., Dingli, F., Loew, D., Mercher, T., Dekker, J., and Heard, E.° (2020). SPEN integrates transcriptional and epigenetic control of X-inactivationNature. doi:10.1038/s41586-020-1974-9

Żylicz, J.J.#, Bousard, A.#, Zumer, K., Dossin, F., Mohammad, E., da Rocha, S.T., Schwalb, B., Syx, L., Dingli, F., Loew, D., Cramer, P., and Heard, E.° (2019). The implication of early chromatin changes in X chromosome inactivation. Cell, 176, 182-197. doi:10.1016/j.cell.2018.11.041

Bousard, A.#, Raposo, A.C.#Żylicz, J.J.#, Picard, C., Pires, V.B., Qi, Y., Gil, C., Syx, L., Chang, H.Y., Heard, E. °, and da Rocha, S.T.° (2019). The role of Xist‐mediated Polycomb recruitment in the initiation of X‐chromosome inactivation. EMBO Reports. doi:10.15252/embr.201948019

van Bemmel, J.G.#°, Galupa, R.#, Gard, C., Servant, N., Picard, C., Davies, J., Szempruch, A.J., Zhan, Y., Żylicz, J.J., Nora, E.P., Lameiras, S., de Wit, E., Gentien, D., Baulande, S., Giorgetti, L., Guttman, M., Hughes, J.R., Higgs, D.R., Gribnau, J., and Heard, E. °(2019). The bipartite TAD organization of the X-inactivation center ensures opposing developmental regulation of Tsix and Xist. Nat Genetics, 51, 1024-1034. doi:10.1038/s41588-019-0412-0

Żylicz, J.J.#, Borensztein, M.#, Wong, F.C., Huang, Y., Lee, C., Dietmann, S., and Surani, M.A.° (2018). G9a regulates temporal preimplantation developmental program and lineage segregation in blastocystElife. doi:10.7554/eLife.33361

Huang, Y., Kim, J.K., Do, D.V., Lee, C., Penfold, C.A., Żylicz, J.J., Marioni, J.C., Hackett, J.A., and Surani, M.A.° (2017). Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transitionElife. doi:10.7554/eLife.22345

Murakami, K.#, Gunesdogan, U.#Żylicz, J.J., Tang W.W.C., Sengupta, R., Kobayashi T., Kim S., Butler R., Dietmann S., and Surani, M.A.° (2016). NANOG alone induces germ cells in competent in vitro epiblast by activating regulatory elements. Nature, 529, 403-407. doi:10.1038/nature16480

Żylicz, J.J., Dietmann, S., Gunesdogan, U., Hackett, J.A., Cougot, D., Lee, C., and Surani, M.A.° (2015). Chromatin dynamics and the role of G9a in gene regulation and enhancer silencing during early mouse development. Elife, 4. doi:10.7554/eLife.09571

Kim, S., Gunesdogan, U., Żylicz, J.J., Hackett, J.A., Cougot, D., Bao, S., Lee, C., Dietmann, S., Allen, G.E., Sengupta, R., and Surani, M.A.° (2014). PRMT5 protects genomic integrity during global DNA demethylation in primordial germ cells and preimplantation embryosMolecular Cell, 56, 564-579. doi:10.1016/j.molcel.2014.10.003

Hackett, J.A., Sengupta, R.#Żylicz, J.J.#, Murakami, K.#, Lee, C., Down, T.A., and Surani, M.A.° (2013). Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosineScience, 339, 448-452. doi:10.1126/science.1229277

Hackett, J.A., Żylicz, J.J., and Surani, M.A.° (2012). Parallel mechanisms of epigenetic reprogramming in the germline. Trends in Genetics, 28, 164-174. doi:10.1016/j.tig.2012.01.005

Nguyen, K.A., Żylicz, J., Szczesny, P., Sroka, A., Hunter, N., and Potempa, J.° (2009). Verification of a topology model of PorT as an integral outer-membrane protein in Porphyromonas gingivalisMicrobiology, 155, 328-337. doi:10.1099/mic.0.024323-0

# equal contributions   ° corresponding authors